Peer-reviewed Articles

  1. Perkins, J.; Parida, S.; Clavijo, A.  “Evaluation of Multiplexed Foot-and-Mouth Disease Nonstructural Protein Antibody Assay Against Standardized Bovine Serum Panel” Clin. Vaccine Immunol. 2007, 14, 1472-1482 Abstract in Pubmed
  2. Perkins, J.; Clavijo, A.; Ortiz, J. I.; Salo, T. J.; Holland, H. J.; Hindson, B. J.; McBride, M. T. “Serotyping of Foot-and-Mouth Disease Virus by Multiplexed Immunoassay” J. Vet. Diagn. Invest. 2007, 19, 180-184
  3. Hok, S.; Natarajan, A.; Balhorn, R.; DeNardo, S. J.; DeNardo, G. L.; Perkins, J. “Synthesis and Radiolabeling of Selective High Affinity Ligands Designed to Target Non-Hodgkin’s Lymphoma”Bioconj. Chem. 2007, 8, 912-921 Abstract in Pubmed
  4. Hanna, M. L.; Tarasow, T. M.; Perkins, J. “Mechanistic Differences Between in vitro Assays for Hydrazone-based Small Molecule Inhibitors of Anthrax Lethal Factor” Bioorg. Chem. 2007, 35, 50-58 Abstract in Pubmed
  5. Bunker, B. C.; Huber, D. L.; Kushmerick, J. G.; Dunbar, T.; Kelly, M.; Matzke, C.; Cao, J.; Jeppesen, J. O.; Perkins, J.; Flood, A. H.; Stoddart, J. F. “Switching Surface Chemistry with Supramolecular Machines” Langmuir 2007, 23, 31-34 Abstract in Pubmed
  6. Cockroft, S. L.; Perkins, J.; Zonta, C.; Adams, A.; Spey, S. E.; Low, C. M. R.; Vinter, J. G.; Lawson, K. L.; Urch, C. J.; Hunter, C. A. “Substituent Effects on Aromatic Stacking Interactions” Org. Biomol. Chem. 2007, 5, 1062-1080 Abstract in Pubmed
  7. Balhorn, R. L.; Hok, S.; Burke, P. A.; Lightstone, F. C.; Cosman, M.; Zemla, A.; Mirick, G.; Perkins, J.; Natarajan, A.; Corzett, M.; DeNardo, S. J.; Lehner, T. A.; Albrecht, H.; Gregg, J. P.; DeNardo, G. L.  “Selective High Affinity Ligand (SHAL) “Antibody Mimics” for Cancer Diagnosis and Therapy: Initial Application to Lymphoma/Leukemia” Clin. Cancer Res.  2007, 13, 5621s-5628s Abstract in Pubmed
  8. DeNardo, G. L.; Natarajan, A.; Hok, S.; Perkins, J.; Cosman, M.; DeNardo, S. J.; Lightstone, F. C.; Mirick, G.; Miers, L. A.; Yuan, A.; Xiong, C-Y.; Balhorn, R. L. “Pharmacokinetic Characterization in Xenografted Mice of a Series of First Generation Mimics for HLA-DR Antibody, Lym-1, as Carrier Molecules to Image and Treat Lymphoma” J. Nucl. Med. 2007, 48, 1338-1347 Abstract in Pubmed
  9. DeNardo, G. L.; Hok, S.; Natarajan, A.; Cosman, M.; DeNardo, S. J.; Lightstone, F. C.; Mirick, G.; Yuan, A.; Perkins, J.; Sysko, V. V.; Lehmann, J.; Balhorn, R. L. “Characteristics of Dimeric (bis) bidentate Selective High Affinity Ligands (SHALs) as HLA-DR10 Beta Antibody Mimics Targeting Non-Hodgkin’s Lymphoma (NHL)” Int. J. Oncology 2007, 31, 729-740 Abstract in Pubmed
  10. Perkins, J.; Clavijo, A.; Hindson, B. J.; Lenhoff, R. J.; McBride, M. T. “Multiplexed Detection of Antibodies to Nonstructural Proteins of Foot-and-Mouth Disease” Anal. Chem. 2006, 78, 5462-5468 Abstract in Pubmed
  11. Shinde, R.; Perkins, J.; Contag, C. H. “Luciferin Derivatives for Enhanced in vitro and in vivo Bioluminescence Assays” Biochemistry 2006, 45, 11103-11112 Abstract in Pubmed
  12. Cheung, L. C.; Chung, S.-W.; Chatterji, A.; Lin, T.; Johnson, J. E.; Hok, S.; Perkins, J.; De Yoreo, J. J. “Physical Controls on Directed Virus Assembly at Nanoscale Chemical Templates” J. Am. Chem. Soc. 2006, 128, 10801-10807 Abstract in Pubmed
  13. West, J.; Perkins, J.; Hok, S.; Balhorn, R.; Lightstone, F. C.; Cosman, M.; DeNardo, S. J.; DeNardo, G. L. “Direct Antilymphoma Activity of Novel, First-Generation “Antibody Mimics” that Bind HLA-DR10-Positive Non-Hodgkin’s Lymphoma Cells” Cancer Biother. Radio. 2006, 21, 645-654 Abstract in Pubmed
  14. Cockroft, S. L.; Hunter, C. A.; Lawson, K. R.; Perkins, J.; Urch, C. J. “Electrostatic Control of Stacking Interactions” J. Am. Chem. Soc. 2005, 127, 8594-8595 Abstract in Pubmed
  15. Trevitt, C. R.; Craven, C. J.; Milanesi, L.; Syson, K.; Mattinen, M. L.; Perkins, J.; Annila, A.; Hunter, C. A.; Waltho, J. P. “Enhanced Ligand Affinity for Receptors in Which Components of the Binding Site are Independently Mobile” Chem. Biol. 2005, 12, 89-97 Abstract in Pubmed
  16. Chromy, B. A.; Gonzales, A. D.; Perkins, J.; Choi, M. W.; Corzett, M. H.; Chang, B. C.; Corzett, C. H.; McCutcheon-Maloney, S. L. “Proteomic Analysis of Human Serum by Two-dimensional Electrophoresis After Depletion of High-Abundant Proteins” J. Prot. Res. 2004, 3, 1120-1127 Abstract in Pubmed
  17. Chromy, B. A.; Perkins, J.; Heidbrink, J. L.; Gonzales, A. D.; Murphy, G. A.; Fitch, J. P.; McCutchen-Maloney, S. L. “Proteomic Characterization of Host Response to Yersinia Pestis and Near Neighbors” Biochem. Bioph. Res. Commun.  2004, 320, 474-479 Abstract in Pubmed
  18. Langlois, R. G.; Trebes, J. E.; Dalmasso, E. A.; Ying, Y.; Davies, R. W.; Curzi, M. P.; Colston, B. W.; Turteltaub, K. W.; Perkins, J.; Chromy, B. A.; Choi, M. W.; Murphy G. A.; Fitch, J. P.; McCutcheon-Maloney, S. L. “Serum Protein Profile Alterations in Hemodialysis Patients” Am. J. Nephr. 2004,24, 268-274 Abstract in Pubmed
  19. Adams, H.; Cockroft, S. L.; Guardigli, C.; Hunter, C. A.; Lawson, K. R.; Perkins, J.; Spey, S.; Urch, C. J.; Ford, R. “Experimental Measurement of Noncovalent Interactions Between Halogen and Aromatic Rings” Chembiochem 2004, 5, 657-665 Abstract in Pubmed
  20. Tseng, H. R.; Vignon, S. A.; Celestre, P. C.; Perkins, J.; Jeppesen, J. O.; Di Fabio, A.; Ballardini, R.; Gandolfi, M. T.; Venturi, M.; Balzani, V.; Stoddart, J. F. “Redox-controllable Amphiphilic [2]Rotaxanes” Chemistry 2004, 10, 155-172 Abstract in Pubmed
  21. Jeppesen, J. O.; Nielsen, K.; Perkins, J.; Vignon, S. A.; Di Fabio, A.; Ballardini, R.; Gandolfi, M. T.; Balzani, V.; Becher, J.; Stoddart, J. F. “Amphiphilic Bistable Rotaxanes” Chem. Eur. J. 2003, 9, 2982-3007
  22. Ballardini, R.; Balzani, V.; Clemente-Leon, M.; Credi, A.; Gandolfi, M. T.; Ishow, E.; Perkins, J.; Stoddart, J. F.; Tseng, H.-R.; Wenger, S. “Photoinduced Electron Transfer in a Triad That Can Be Assembled/Dissasembled by Two Different External Outputs.  Toward Molecular Extension Cables” J. Am. Chem. Soc. 2002, 124, 12786-12795 Abstract in Pubmed
  23. Luo, Y.; Collier, C. P.; Jeppesen, J. O.; Nielsen, K. A.; DeIonno, E.; Ho, G.; Perkins, J.; Tseng, H-R.; Yamamoto, T.; Stoddart, J. F.; Heath, J. R. “Two-Dimensional Molecular Electronics Circuits”ChemPhysChem 2002, 3, 519-525 Abstract in Pubmed
  24. Lopez de la Paz; M, Ellis, G.; Perez, M.; Perkins, J.; Jiminez-Barbero, J.; Vicent, C. “Carbohydrate Hydrogen-Bonding Cooperativity – Intramolecular Hydrogen Bonds and Their Cooperative Effect on Intramolecular Processes – Binding to a Hydrogen-Bond Acceptor Molecule” Eur. J. Org. Chem. 2002, 840-855
  25. Collier, C. P.; Jeppesen, J. O.; Luo, Y.; Perkins, J.; Wong, E. W.; Heath, J. R.; Stoddart, J. F. “Molecular-Based Electronically Switchable Tunnel Junction Devices” J. Am. Chem. Soc. 2001, 123, 12632-12641 Abstract in Pubmed
  26. Adams, H.; Hunter, C. A.; Lawson, K. R.; Perkins J.; Spey, S. E.; Urch, C. J. Sanderson, J. M. “A Supramolecular System for Quantifying Aromatic Stacking Interactions” Chemistry 2001, 7(22), 4863-4877 Abstract in Pubmed
  27. Perkins, J.; Collier, C. P.; Heath, J. R.; Jeppesen, J. O.; Luo, Y.; Nielsen, K. A.; Pease, A. R.; Stoddart, J. F.; Wong, E. W. “Toward Artificial Molecular Devices” Molecular Electronics and Bioelectronics 2001, 2, 23-28
  28. Hunter, C. A.; Lawson, K. R.; Perkins J.; Urch, C. J. “Aromatic Stacking Interactions” J. Chem. Soc., Perkin Trans. 2 2001, 651-669 (Review)
  29. Jeppesen, J. O.; Perkins, J.; Becher, J; Stoddart, J. F. “Slow Shuttling in an Amphiphilic Bistable [2]Rotaxane Incorporating a Tetrathiafulvalene Unit” Angew. Chem., Int. Ed. 2001, 40, 1216-1221
  30. Jeppesen, J. O.; Perkins, J.; Becher, J; Stoddart, J. F. “Self-Assembly of an Amphiphilic [2]Rotaxane Incorporating a Tetrathiafulvalene Unit” Org. Lett. 2000, 2, 3547-3550

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